compute_D.RdThis function compute the D matrix with an effect on age and / or plates
compute_D(A_mat, T_mat, exp_grp, sites_sex = NA, coeff_sex = NA, plate_effect = NA)
| A_mat | The A matrix. |
|---|---|
| T_mat | The T matrix. |
| exp_grp | The matrix of experimental data for all the patients. |
| sites_sex | NA by default, set sites affected by sex if you want a sex effect |
| coeff_sex | NA by default, set coeff of sex if you want a sex effect. |
| plate_effect, | Na by default, put plate_effect if you want one |
This function return a matrix of size probes*n with possibly an effect of confounding factors